I liked your idea, but it's hard to read. Anyway it seems simple enough to test. I think there are ways to measure a single atom as you are suggesting, but actually watching it is beyond our eyes abilities. But the measurement is the important part.
Over the past couple of years, with Einstein's E=mc2 centenary, I thought alot about dimensions. Are you familiar with the new 11 dimensional theories and other multidimensional theories that they are using to generate grand unified theories?
I have wondered if some of these dimensions might actually be such things as thought, intention, love/hate, imagination, gestalt, etc. I think there was an episode of StarTrek:tng where Wesley was exposed to that concept too.

Pyrolysis creates reduced carbon! ...Time for the next step in our evolutionary symbiosis with fire.